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dc.contributor.authorHowell, Kerry
dc.contributor.authorDavies, JS
dc.contributor.authorAllcock, AL
dc.contributor.authorBraga-Henriques, A
dc.contributor.authorBuhl-Mortensen, P
dc.contributor.authorCarreiro-Silva, M
dc.contributor.authorDominguez-Carrió, C
dc.contributor.authorDurden, JM
dc.contributor.authorFoster, Nicola
dc.contributor.authorGame, CA
dc.contributor.authorHitchin, B
dc.contributor.authorHorton, T
dc.contributor.authorHosking, B
dc.contributor.authorJones, DOB
dc.contributor.authorMah, C
dc.contributor.authorLaguionie Marchais, C
dc.contributor.authorMenot, L
dc.contributor.authorMorato, T
dc.contributor.authorPearman, TRR
dc.contributor.authorPiechaud, Nils
dc.contributor.authorRoss, RE
dc.contributor.authorRuhl, HA
dc.contributor.authorSaeedi, H
dc.contributor.authorStefanoudis, PV
dc.contributor.authorTaranto, GH
dc.contributor.authorThompson, MB
dc.contributor.authorTaylor, JR
dc.contributor.authorTyler, P
dc.contributor.authorVad, J
dc.contributor.authorVictorero, L
dc.contributor.authorVieira, RP
dc.contributor.authorWoodall, LC
dc.contributor.authorXavier, JR
dc.contributor.authorWagner, D
dc.date.accessioned2020-01-15T11:15:40Z
dc.date.issued2019-12-31
dc.identifier.issn1932-6203
dc.identifier.issn1932-6203
dc.identifier.otherARTN e0218904
dc.identifier.urihttp://hdl.handle.net/10026.1/15313
dc.description.abstract

Video and image data are regularly used in the field of benthic ecology to document biodiversity. However, their use is subject to a number of challenges, principally the identification of taxa within the images without associated physical specimens. The challenge of applying traditional taxonomic keys to the identification of fauna from images has led to the development of personal, group, or institution level reference image catalogues of operational taxonomic units (OTUs) or morphospecies. Lack of standardisation among these reference catalogues has led to problems with observer bias and the inability to combine datasets across studies. In addition, lack of a common reference standard is stifling efforts in the application of artificial intelligence to taxon identification. Using the North Atlantic deep sea as a case study, we propose a database structure to facilitate standardisation of morphospecies image catalogues between research groups and support future use in multiple front-end applications. We also propose a framework for coordination of international efforts to develop reference guides for the identification of marine species from images. The proposed structure maps to the Darwin Core standard to allow integration with existing databases. We suggest a management framework where high-level taxonomic groups are curated by a regional team, consisting of both end users and taxonomic experts. We identify a mechanism by which overall quality of data within a common reference guide could be raised over the next decade. Finally, we discuss the role of a common reference standard in advancing marine ecology and supporting sustainable use of this ecosystem.

dc.format.extente0218904-e0218904
dc.format.mediumElectronic-eCollection
dc.languageen
dc.language.isoen
dc.publisherPublic Library of Science (PLoS)
dc.subjectAnimals
dc.subjectArtificial Intelligence
dc.subjectBiodiversity
dc.subjectClassification
dc.subjectData Curation
dc.subjectDatabases, Factual
dc.subjectEcology
dc.subjectEcosystem
dc.subjectImage Processing, Computer-Assisted
dc.subjectMarine Biology
dc.titleA framework for the development of a global standardised marine taxon reference image database (SMarTaR-ID) to support image-based analyses
dc.typejournal-article
dc.typeJournal Article
dc.typeResearch Support, Non-U.S. Gov't
dc.typeResearch Support, U.S. Gov't, Non-P.H.S.
plymouth.author-urlhttps://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000515096600003&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=11bb513d99f797142bcfeffcc58ea008
plymouth.issue12
plymouth.volume14
plymouth.publication-statusPublished online
plymouth.journalPLOS ONE
dc.identifier.doi10.1371/journal.pone.0218904
plymouth.organisational-group/Plymouth
plymouth.organisational-group/Plymouth/Faculty of Science and Engineering
plymouth.organisational-group/Plymouth/Faculty of Science and Engineering/School of Biological and Marine Sciences
plymouth.organisational-group/Plymouth/REF 2021 Researchers by UoA
plymouth.organisational-group/Plymouth/REF 2021 Researchers by UoA/UoA07 Earth Systems and Environmental Sciences
plymouth.organisational-group/Plymouth/Research Groups
plymouth.organisational-group/Plymouth/Research Groups/Marine Institute
plymouth.organisational-group/Plymouth/Users by role
plymouth.organisational-group/Plymouth/Users by role/Academics
plymouth.organisational-group/Plymouth/Users by role/Researchers in ResearchFish submission
dc.publisher.placeUnited States
dcterms.dateAccepted2019-12-09
dc.rights.embargodate2020-1-17
dc.identifier.eissn1932-6203
dc.rights.embargoperiodNot known
rioxxterms.versionofrecord10.1371/journal.pone.0218904
rioxxterms.licenseref.urihttp://www.rioxx.net/licenses/all-rights-reserved
rioxxterms.typeJournal Article/Review
plymouth.funderInfluence of population connectivity on depth-dependent diversity of deep-sea marine benthic biota::NERC


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